BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B10SP1|AL425817
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1606 0.0
>3x_Contig1542
Length = 13810
Score = 1606 bits (810), Expect = 0.0
Identities = 817/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Minus
Query: 1 gatcttaagcaactatcacgtaaagtttagagttgtattgttattgagattgatttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9335 gatcttaagcaactatcacgtaaagtttagagttgtattgttattgagattgatttgaat 9276
Query: 61 attgtaacgtgctaccaggagtattatttacaaattatatttgaagatgccagttaccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9275 attgtaacgtgctaccaggagtattatttacaaattatatttgaagatgccagttaccgt 9216
Query: 121 tttacccttagaaaataccccattaggtgctaagatccaactaccagatggatgcagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9215 tttacccttagaaaataccccattaggtgctaagatccaactaccagatggatgcagtga 9156
Query: 181 tccttcagagttatctgaagaagatttcaaggacttgtacgatgcgttgatgacttactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9155 tccttcagagttatctgaagaagatttcaaggacttgtacgatgcgttgatgacttactc 9096
Query: 241 tgttgttgttattcctggtatggaagatttgaagcccgagtcacaatggagattgactac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9095 tgttgttgttattcctggtatggaagatttgaagcccgagtcacaatggagattgactac 9036
Query: 301 tatgtttgatccaacttgtgatcaaactgggaaatcttatggtcatggcaaggaatttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9035 tatgtttgatccaacttgtgatcaaactgggaaatcttatggtcatggcaaggaatttcg 8976
Query: 361 ccatcaaaactctgtcttgaggcgtgatggtatgacaattcctgatcaacctcaggtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8975 ccatcaaaactctgtcttgaggcgtgatggtatgacaattcctgatcaacctcaggtcca 8916
Query: 421 agtattaggacaagggcaatggcctgcaggccattacggcatgggggagcttaacttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8915 agtattaggacaagggcaatggcctgcaggccattacggcatgggggagcttaacttgag 8856
Query: 481 acatcctactcatttcgatttccatgacaaaccattgactgatcaagaagcatttgaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8855 acatcctactcatttcgatttccatgacaaaccattgactgatcaagaagcatttgaaga 8796
Query: 541 ggacaaaacaagattctaccgttggcacattgattctgcattatatgcactatcacctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8795 ggacaaaacaagattctaccgttggcacattgattctgcattatatgcactatcacctcc 8736
Query: 601 agtggtcacaactttgttaggtattcacgttccaccagaatccagaaaacagaagatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8735 agtggtcacaactttgttaggtattcacgttccaccagaatccagaaaacagaagatcca 8676
Query: 661 ttatgatgatactggtgatgtattggaagtaactcaaggtgctactagctttgtgtctgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8675 ttatgatgatactggtgatgtattggaagtaactcaaggtgctactagctttgtgtctgg 8616
Query: 721 tgctaacgcctttgacttactatctgaagaggatcaacaacgtgctttgaaaacaacagt 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8615 t-ctaacgcctttgacttactatctgaagaggatcaacaacgtgctttgaaaacaacagt 8557
Query: 781 tgtgtatgcaccacatccttatatcttcatttctcctg 818
||||||||||||||||||||||||||||||||||||||
Sbjct: 8556 tgtgtatgcaccacatccttatatcttcatttctcctg 8519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6206
Number of Sequences: 1807
Number of extensions: 6206
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)